Example BED file entries
BAG4-FGFR1.B2F6 1 156 AMP1 . + . TYPE=Fusion;BREAKPOINT=36; FP_GENE_ID=BAG4; FP_ GENE_STRAND=+; FP_EXON_NUM=2; TP_GENE_ID=FGFR1; TP_GENE_STRAND=-; TP_EXON_NUM=6; FP_CHROM=chr8; FP_START=3805025 7; FP_END=38050313; TP_CHROM=chr8; TP_START=38283673; TP_END=38283763; FP_TRANSCRIPT_ID=ENSG00000156735; TP_TRANSCRIPT_ID=ENSG00000077782 ITGB7.ENCTRL.E14E15 1 132 AMP99 . + . TYPE=CONTROL; FP_GENE_ ID=ITGB7; FP_CHROM=chr12; FP_EXON_NUM=14,15; FP_START=53586113,53585786; FP_END=53586228,53585803; FP_GENE_STRA ND=-; FP_TRANSCRIPT_ID=ENSG00000139626
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